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Cultivation of Edible filamentous Fungi Utilizing Bio-based Volatile Fatty Acids
University of Borås, Faculty of Textiles, Engineering and Business.ORCID iD: 0000-0003-0278-7321
2025 (English)Doctoral thesis, comprehensive summary (Other academic)
Sustainable development
According to the author(s), the content of this publication falls within the area of sustainable development.
Abstract [en]

Human activities produce vast amounts of organic waste, which poses environmental, social, andeconomic challenges. To address these issues, various treatment methods have been explored totransform waste into valuable resources. Anaerobic digestion (AD) offers a versatile andenvironmentally sustainable waste management solution, particularly in comparison to traditionalmethods, such as composting, incineration, and landfilling. Although AD is well established forbiogas production, its potential to generate other valuable products such as hydrogen and volatilefatty acids (VFAs) is of increasing interest. Part of this thesis aimed to investigate VFA productionfrom manure using AD-incorporating membrane bioreactors (MBRs) for in situ VFA recovery. Theresulting VFA-rich effluents, containing short-chain carboxylic acids (C-2 to C-6) and essentialnutrients, such as nitrogen and minerals, demonstrated potential as substrates for filamentous fungalbiomass cultivation. Filamentous fungi are economically important because of their diversemetabolisms and adaptable cultivation methods. They are utilized in various industries, and theirbiomass can be used for food and feed or for the extraction of valuable products. Therefore, theprimary focus of this thesis is to explore a novel and sustainable approach to further convert VFAsinto high-value fungal biomass. However, owing to the antimicrobial properties of VFAs, theirinhibitory effects were also investigated.

In this thesis, semi-continuous immersed membrane bioreactors (iMBRs) were applied for efficientproduction and in situ recovery of VFAs from the AD of cow and chicken manure. The processesyielded particle-free, VFA-rich effluents containing up to 18 g/L of VFAs along with essentialnutrients. Initial experiments on VFA utilization focused on optimizing fungal growth byinvestigating the effects of nutrient supplementation, pH, and acid concentrations. The resultsindicated that the optimal pH range for fungal growth was between 6 and 7, with Aspergillus oryzaedemonstrating tolerance to acetic acid concentrations of up to 9 g/L. Cultivation trials utilizing VFAeffluents from various organic waste sources confirmed the potential for biomass production, witheffluents rich in nitrogen and acetic acid promoting fungal growth and yielding biomass containingup to 47% crude protein. However, microbial growth is often hindered by the inhibitory effects ofvarying acid concentrations in VFA effluents. Detailed analysis of the inhibitory effects of individualVFAs (acetic, propionic, and butyric acids) and their mixtures on fungal strains, including A. oryzae,revealed that propionic and butyric acids substantially inhibited fungal growth. To mitigate acidinhibition and improve VFA utilization, fed-batch feeding strategies were applied. This resulted in athree-fold increase in biomass yield compared with batch cultivation, demonstrating enhanced acidconsumption. Furthermore, an upscaled fed-batch system was implemented, leading to acceleratedfermentation and improved biomass yields with a high crude protein content of nearly 50%.

In conclusion, utilizing VFA-rich effluents recovered from the AD of organic residues as sole carbonand nutrient sources proved promising for producing edible fungal biomass, offering an attractivestrategy for organic waste valorization within a circular bioeconomy framework.

Place, publisher, year, edition, pages
Borås: Högskolan i Borås, 2025.
Series
Skrifter från Högskolan i Borås, ISSN 0280-381X ; 162
Keywords [en]
Aspergillus oryzae, edible filamentous fungi, biomass cultivation, manure, organic waste, anaerobic digestion, volatile fatty acids, fed batch
National Category
Bioprocess Technology
Research subject
Resource Recovery
Identifiers
URN: urn:nbn:se:hb:diva-34015ISBN: 978-91-89833-85-2 (print)ISBN: 978-91-89833-86-9 (electronic)OAI: oai:DiVA.org:hb-34015DiVA, id: diva2:1981418
Public defence
2025-09-30, C203, Allégatan 1, Borås, 10:00 (English)
Opponent
Supervisors
Available from: 2025-09-09 Created: 2025-07-04 Last updated: 2025-09-24Bibliographically approved
List of papers
1. Membrane bioreactor-assisted volatile fatty acids production and in situ recovery from cow manure
Open this publication in new window or tab >>Membrane bioreactor-assisted volatile fatty acids production and in situ recovery from cow manure
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2021 (English)In: Bioresource Technology, ISSN 0960-8524, E-ISSN 1873-2976, Bioresource Technology, Vol. 321, article id 124456Article in journal (Refereed) Published
Abstract [en]

Cow manure (CM) generation in large volumes has for long been considered a waste management challenge. However, the organic content of CM signals opportunities for the production of value-added bioproducts such as volatile fatty acids (VFAs) through anaerobic digestion (AD). However, a robust VFAs fermentation process requires effective methane formation inhibition and enhance VFAs recovery. In this study, thermal pretreatment was applied to inhibit methanogens for enhanced VFAs production and an immersed membrane bioreactor (iMBR) for in situ recovery of VFAs in a semi-continuous AD. Maximal VFAs yield of 0.41 g VFAs/g volatile solids (VS) was obtained from thermally-treated CM without inoculum addition. The CM was further fed to the iMBR operating at organic loading rates of 0.8–4.7 gVS/L.d. The VFAs concentration increased to 6.93 g/L by rising substrate loading to 4.7 g VS/L.d. The applied iMBR set-up was successfully used for stable long-term (114 days) VFAs production and recovery.

Place, publisher, year, edition, pages
Elsevier, 2021
Keywords
Anaerobic digestion, Cow manure, Membrane bioreactor, Volatile fatty acids, Bioproducts, Bioreactors, Fertilizers, Manures, Recovery, Substrates, Fermentation process, Immersed membrane bioreactors, Management challenges, Organic loading rates, Substrate loading, Thermal pre-treatment, Volatile fatty acids (VFAs), acetic acid, butyric acid, calcium ion, carbon dioxide, copper, formic acid, hydrogen, iron, magnesium, manganese, methane, phosphoric acid, potassium, propionic acid, sodium ion, volatile fatty acid, zinc ion, bioreactor, concentration (composition), fermentation, inhibition, inoculation, membrane, methanogenic bacterium, anaerobic sludge, Article, batch fermentation, chemical oxygen demand, cow, female, food waste, gas chromatography, limit of detection, manure, methanogen, microbial diversity, municipal wastewater, nonhuman, pH, priority journal, sludge, suspended particulate matter, thermal conductivity, waste water management, anaerobic growth, animal, bovine, Anaerobiosis, Animals, Cattle, Fatty Acids, Volatile
National Category
Industrial Biotechnology
Research subject
Resource Recovery; Resource Recovery; Resource Recovery
Identifiers
urn:nbn:se:hb:diva-25818 (URN)10.1016/j.biortech.2020.124456 (DOI)000604219100006 ()33276207 (PubMedID)2-s2.0-85097198010 (Scopus ID)
Funder
Swedish Research Council, 2018-04479
Available from: 2021-07-06 Created: 2021-07-06 Last updated: 2025-09-24Bibliographically approved
2. Volatile Fatty Acids (VFA) Production and Recovery from Chicken Manure Using a High-Solid Anaerobic Membrane Bioreactor (AnMBR)
Open this publication in new window or tab >>Volatile Fatty Acids (VFA) Production and Recovery from Chicken Manure Using a High-Solid Anaerobic Membrane Bioreactor (AnMBR)
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2022 (English)In: Membranes, E-ISSN 2077-0375, Vol. 12, no 11, article id 1133Article in journal (Refereed) Published
Abstract [en]

Acidogenic fermentation of chicken manure (CM) for production and recovery of volatile fatty acids (VFA) is an interesting biological waste-to-value approach compared to benchmark organic waste management strategies. Considering the wide range of high value applications of VFA, a semi-continuous immersed anaerobic membrane bioreactor (AnMBR) was applied to boost VFA productivity and yield, while reducing downstream processing stages assisting the recovery of VFA. In this regard, the effect of parameters such as pH and organic loading rates (OLR) on the overall bioconversion and filtration performance was investigated. Thermal-shocked CM was applied both as inoculum and substrate. A very high VFA yield (0.90 g-VFA/g-VS) was obtained in the treatment with no pH control (~8.2) at an OLR of 2 g-VS/(L·d), presenting 24% higher yield compared to that of the controlled pH. Batch assays further demonstrated the enhanced hydrolysis and acidogenesis activities at weak alkaline conditions. A long-term (78 days) fermentation and filtration was successfully performed, where stable membrane filtration performance was experienced for about 50 days under high-solid (suspended solid of 37–45 g/L) and high flux (20 L/(m2·h)) conditions. Results suggest that AnMBR of CM is a feasible and promising process for VFA production and recovery.

Keywords
immersed membrane bioreactor, volatile fatty acids, chicken manure, acidogenic fermentation
National Category
Other Industrial Biotechnology
Research subject
Resource Recovery; Resource Recovery
Identifiers
urn:nbn:se:hb:diva-29183 (URN)10.3390/membranes12111133 (DOI)000895507300001 ()2-s2.0-85146800883 (Scopus ID)
Available from: 2023-01-03 Created: 2023-01-03 Last updated: 2025-09-24Bibliographically approved
3. Cultivation of edible filamentous fungus Aspergillus oryzae on volatile fatty acids derived from anaerobic digestion of food waste and cow manure
Open this publication in new window or tab >>Cultivation of edible filamentous fungus Aspergillus oryzae on volatile fatty acids derived from anaerobic digestion of food waste and cow manure
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2021 (English)In: Bioresource Technology, ISSN 0960-8524, E-ISSN 1873-2976, Vol. 337, article id 125410Article in journal (Refereed) Published
Abstract [en]

In a circular economy approach, edible filamentous fungi (single cell protein) can be cultivated on volatile fatty acids (VFAs) derived from anaerobic digestion (AD) of organic-rich waste streams. In this study, the effect of pH, concentration/distribution of VFAs, nutrient supplementation, and type of waste on Aspergillus oryzae cultivation on synthetic VFAs, and actual VFAs derived from AD of food waste and cow manure were investigated. The optimal pH for A. oryzae growth on VFAs were 6 and 7 with maximum acetic acid consumption rates of 0.09 g/L. h. The fungus could thrive on high concentrations of acetic (up to 9 g/L) yielding 0.29 g dry biomass/gVFAs(fed). In mixed VFAs cultures, A. oryzae primarily consumed caproic and acetic acids reaching a biomass yield of 0.26 g dry biomass/gVFAs(fed) (containing up to 41% protein). For waste-derived VFAs at pH 6, the fungus successfully consumed 81-100% of caproic, acetic, and butyric acids.

Keywords
Food waste, Anaerobic digestion, Volatile fatty acids, Edible filamentous fungi, Aspergillus oryzae, ACETIC-ACID, SACCHAROMYCES-CEREVISIAE, BIOMASS PROTEIN, GROWTH, INHIBITION, ETHANOL, PH, FERMENTATION, MICROORGANISMS, PROPORTIONS
National Category
Other Industrial Biotechnology
Research subject
Resource Recovery; Resource Recovery
Identifiers
urn:nbn:se:hb:diva-26311 (URN)10.1016/j.biortech.2021.125410 (DOI)000677956400003 ()2-s2.0-85109013033 (Scopus ID)
Available from: 2021-08-30 Created: 2021-08-30 Last updated: 2025-09-24
4. Evaluation of the cultivation of aspergillus oryzae on organic waste-derived vfa effluents and its potential application as alternative sustainable nutrient source for animal feed
Open this publication in new window or tab >>Evaluation of the cultivation of aspergillus oryzae on organic waste-derived vfa effluents and its potential application as alternative sustainable nutrient source for animal feed
2021 (English)In: Sustainability, E-ISSN 2071-1050, Vol. 13, no 22, article id 12489Article in journal (Refereed) Published
Abstract [en]

Considering the projected demand for protein supplementation in animal feed, as well as prioritizing plant-based protein provision for the growing human population, great stress is imposed on conventional protein sources, calling for new sustainable alternatives. In this regard, the production and application of single-cell proteins (SCPs) has proven to be a promising alternative. Therefore, in this study, volatile fatty acids (VFAs) effluents recovered from anaerobically digested FW, CKM, CM, and their combinations were applied for the cultivation of edible filamentous fungi Aspergillus oryzae. The biomass was further evaluated considering its protein, fat and alkali insoluble material contents. The maximum fungal biomass yielded of 0.47 ± 0.00 and 0.37 ± 0.00 g dry biomass/g tVFAsCODeq.consumed, with up to 47% protein and 5% fat content successfully cultivated in shake flasks and bench scale reactors, respectively. In addition to the production of protein-rich biomass, significant reductions in medium COD (25–58%) and ammonium (33–48%) were achieved. The results presented in this research work imply that using waste-derived VFAs for the production of animal feed grade SCP is an innovative approach that can contribute to the economy and sustainability of animal feed production process. © 2021 by the authors. Licensee MDPI, Basel, Switzerland.

Place, publisher, year, edition, pages
MDPI, 2021
Keywords
Animal feed, Aspergillus oryzae, Organic-rich residues, Single-cell protein, Volatile fatty acids
National Category
Other Industrial Biotechnology
Research subject
Resource Recovery
Identifiers
urn:nbn:se:hb:diva-26940 (URN)10.3390/su132212489 (DOI)000724249800001 ()2-s2.0-85119172843 (Scopus ID)
Available from: 2021-11-24 Created: 2021-11-24 Last updated: 2025-09-24Bibliographically approved
5. The effect of operation mode on fungal cultivation on agro-industrial residue derived volatile fatty acids
Open this publication in new window or tab >>The effect of operation mode on fungal cultivation on agro-industrial residue derived volatile fatty acids
(English)In: Article in journal (Refereed) Submitted
National Category
Bioprocess Technology
Research subject
Resource Recovery
Identifiers
urn:nbn:se:hb:diva-34192 (URN)
Available from: 2025-09-04 Created: 2025-09-04 Last updated: 2025-09-24Bibliographically approved
6. Evaluating scale-up cultivation modes for Aspergillus oryzae biomass production using VFA-rich effluents from agro-industrial residues
Open this publication in new window or tab >>Evaluating scale-up cultivation modes for Aspergillus oryzae biomass production using VFA-rich effluents from agro-industrial residues
2025 (English)In: BioTech, E-ISSN 2673-6284, Vol. 14, no 4, article id 76Article in journal (Refereed) Published
Abstract [en]

Organic-waste-derived volatile fatty acids (VFAs) are promising substrates for fungal biomass cultivation, offering a nutrient-rich medium capable of meeting microbial growth requirements. However, the growth and biomass productivity are highly influenced by the VFAs’ composition and mode of operation. This study investigated the cultivation of Aspergillus oryzae fungal biomass using agro-industrial-derived VFA effluent, employing repeated-batch and fed-batch (stepwise and continuous-feeding) cultivation modes to evaluate fungal growth and biomass composition. The highest dry biomass yield of 0.41 dry biomass/gVFAsfed (g/g) was achieved in fed-batch mode with continuous feeding, where the biomass exhibited pellet morphology, facilitating ease of harvesting. The crude protein content varied according to the cultivation strategy, reaching 45–53% in continuous-feeding fed-batch mode, while it was 34–42% in stepwise fed-batch mode. Additionally, the fungal biomass contained significant levels of essential macronutrients and trace elements, including Mg, Ca, K, Mn, and Fe, which are crucial if the biomass is intended to be used in animal feed formulations. This study highlights the effects of cultivation modes on biomass composition and the potential of VFA-derived fungal biomass as a sustainable feed ingredient.

Keywords
Aspergillus oryzae, cultivation modes, fed batch, fungal biomass composition, scale-up, volatile fatty acids
National Category
Industrial Biotechnology
Research subject
Resource Recovery
Identifiers
urn:nbn:se:hb:diva-34193 (URN)10.3390/biotech14040076 (DOI)001646840000001 ()41133687 (PubMedID)2-s2.0-105025964864 (Scopus ID)
Available from: 2025-09-04 Created: 2025-09-04 Last updated: 2026-03-06Bibliographically approved
7. Recent Developments in the Application of Filamentous Fungus Aspergillus oryzae in Ruminant Feed
Open this publication in new window or tab >>Recent Developments in the Application of Filamentous Fungus Aspergillus oryzae in Ruminant Feed
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2024 (English)In: Animals, E-ISSN 2076-2615, Vol. 14, no 16, article id 2427Article in journal (Refereed) Published
Abstract [en]

The resource-intensive nature of the ruminant farming sector, which has been exacerbated by population growth and increasing pressure to reduce feed antibiotics and growth promoters, has sparked interest in looking for sustainable alternative feed sources to enhance ruminant production efficiency. Edible filamentous fungi, rich in macronutrients like proteins, offer promise in reducing the reliance on conventional protein sources and antimicrobials to improve feed quality and animal performance. The inclusion of single-cell proteins, particularly filamentous fungi, in ruminant feed has long been of scientific and industrial interest. This review focuses on the potential application of the extensively studied Aspergillus oryzae and its fermentation extracts in ruminant nutrition. It provides an overview of conventional ruminant feed ingredients, supplements, and efficiency. Additionally, this review analyzes the re-utilization of organic residues for A. oryzae cultivation and examines the effects of adding fungal extracts to ruminant feed on ruminal digestibility and animal performance, all within a circular bioeconomy framework.

Place, publisher, year, edition, pages
MDPI, 2024
Keywords
edible filamentous fungi, Aspergillus oryzae, ruminant feed, ruminal fermentation, sustainable feed
National Category
Animal and Dairy Science
Research subject
Resource Recovery; Resource Recovery
Identifiers
urn:nbn:se:hb:diva-32516 (URN)10.3390/ani14162427 (DOI)001307055700001 ()
Funder
Vinnova, number 2020-03664Swedish Research Council Formas, 2021-02458
Available from: 2024-09-09 Created: 2024-09-09 Last updated: 2025-09-24Bibliographically approved
8. Evaluation of in vitro digestibility of Aspergillus oryzae fungal biomass grown on organic residue derived-VFAs as a promising ruminant feed supplement
Open this publication in new window or tab >>Evaluation of in vitro digestibility of Aspergillus oryzae fungal biomass grown on organic residue derived-VFAs as a promising ruminant feed supplement
Show others...
2023 (English)In: Journal of Animal Science and Biotechnology, E-ISSN 2049-1891, Vol. 14, article id 120Article in journal (Refereed) Published
Abstract [en]

Background

As demand for high quality animal feed continues to raise, it becomes increasingly important to minimize the environmental impact of feed production. An appealing sustainable approach to provide feed fractions is to use organic residues from agro-food industry. In this regard, volatile fatty acids (VFAs) such as acetic, propionic and butyric acids, derived from bioconversion of organic residues can be used as precursors for production of microbial protein with ruminant feed inclusion potential. This study aims to investigate the in vitro digestibility of the Aspergillus oryzae edible fungal biomass cultivated on VFAs-derived from anaerobic digestion of residues. The produced fungal protein biomass, along with hay clover silage and rapeseed meal were subjected to various in vitro assays using two-stage Tilley and Terry (TT), gas, and bag methods to evaluate and compare its digestibility for application in ruminant feed.

Results

The produced fungal biomass contained a higher crude protein (CP) (41%–49%) and rather similar neutral detergent fiber (NDF) (41%–56%) compared to rapeseed meal. The rumen in vitro dry matter digestibility (IVDMD) of the fungal biomass in the TT method ranged from 82% to 88% (statistically similar to that of the gas method (72% to 85%)). The IVDMD of fungal biomass were up to 26% and 40% greater than that of hay clover silage and rapeseed meal, respectively. The type of substrate and bag method had pronounced effect on the fermentation products (ammonium-N (NH4+-N), total gas and VFAs). Fungal biomass digestion resulted in the highest release of NH4+-N (340–540 mg/L) and the ratio of acetate to propionate ratio (3.5) among subjected substrates.

Conclusion

The results indicate that gas method can be used as a reliable predictor for IVDMD as well as fermentation products. Furthermore, the high IVDMD and fermentation product observed for Aspergillus oryzae fungal biomass digestion, suggest that the supplementation of fungal biomass will contribute to improving the rumen digestion by providing necessary nitrogen and energy to the ruminant and microbiota.

Keywords
Aspergillus oryzae, Fungal biomass, In vitro dry matter digestibility, Ruminant feed, Volatile fatty acids
National Category
Agricultural Science
Research subject
Resource Recovery
Identifiers
urn:nbn:se:hb:diva-30702 (URN)10.1186/s40104-023-00922-4 (DOI)001084403800001 ()2-s2.0-85173759399 (Scopus ID)
Available from: 2023-11-01 Created: 2023-11-01 Last updated: 2025-09-24Bibliographically approved

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