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Dietary Filamentous Fungi and Duration of Feeding Modulates Gut Microbial Composition in Rainbow Trout (Oncorhynchus mykiss)
Sveriges lantbruksuniversitet.
University of Borås, Faculty of Textiles, Engineering and Business.
Sveriges lantbruksuniversitet.
Sveriges lantbruksuniversitet.
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2021 (English)In: Frontiers in Marine Science, E-ISSN 2296-7745, Vol. 8, article id 728569Article in journal (Refereed) Published
Sustainable development
According to the author(s), the content of this publication falls within the area of sustainable development.
Abstract [en]

Changes in gut microbial composition over time in rainbow trout fed differentially processed diets supplemented with the filamentous fungi Neurospora intermedia were investigated in a 30-day feeding trial. Fish were fed a reference diet, non-preconditioned diet (NPD), or preconditioned (heat-treated) diet (PD), with the same inclusion level of N. intermedia in diets NPD and PD. Gut microbiota were analyzed on day 0, 10, 20, and 30. Gut microbial composition was similar for all diets on day 0, but was significantly different at day 10 and day 20. On day 30, the gut again contained similar communities irrespective of diet. The overall gut microbiota for each diet changed over time. Abundance of Peptostreptococcus and Streptococcus was higher in the initial days of feeding in fish fed on commercial diet, while a significant increase in lactic acid bacteria (Lactococcus lactis) was observed on day 30. Feed processing (preconditioning) did not contribute largely in shaping the gut microbiome. These results indicate that dietary manipulation and duration of feeding should be considered when evaluating gut microbial composition in cultured fish. A minimum 30-day feeding trial is suggested for gut microbiome, host and diet interaction studies. Copyright © 2021 Singh, Karimi, Vidakovic, Dicksved, Langeland, Ferreira, Taherzadeh, Kiessling and Lundh.

Place, publisher, year, edition, pages
Frontiers Media S.A. , 2021. Vol. 8, article id 728569
Keywords [en]
amplicon sequencing, duration of feeding, filamentous fungi, fish, gut microbiome, Lactococcus, rainbow trout
National Category
Fish and Aquacultural Science
Research subject
Resource Recovery
Identifiers
URN: urn:nbn:se:hb:diva-27007DOI: 10.3389/fmars.2021.728569ISI: 000721113900001Scopus ID: 2-s2.0-85118687482OAI: oai:DiVA.org:hb-27007DiVA, id: diva2:1618161
Note

Export Date: 8 December 2021; Article; Correspondence Address: Lundh, T.; Department of Animal Nutrition and Management, Sweden; email: Torbjörn.lundh@slu.se

Available from: 2021-12-08 Created: 2021-12-08 Last updated: 2024-02-01Bibliographically approved
In thesis
1. Filamentous Fungi as a Sustainable Ingredient for Fish Feed
Open this publication in new window or tab >>Filamentous Fungi as a Sustainable Ingredient for Fish Feed
2024 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Limited feed ingredients hinder aquaculture’s rapid growth. Current unsustainable fish feeding practices use ingredients like fishmeal and soybean meal, which could be directly consumed for as human food. This demands novel alternatives for fish nutrition. While studies have explored plant/animal-based protein sources, they have not fully met fish feed nutritional needs. Single-cell proteins like bacteria, algae, and fungi are gaining attention as sustainable alternatives to traditional fish feed protein sources. Filamentous fungal biomass stands out with its high protein content, essential amino acids, and functional amino acids like lysine and arginine. This biomass also provides other nutrients that fish commonly require, such as essential fatty acids (linoleic acid, linolenic acid, arachidonic acid), minerals (phosphorus, potassium, calcium), vitamins (B, C, E), and pigments. Incorporating cell wall components like chitin, chitosan, and beta-glucans makes fungal biomass a functional feed ingredient that enhances fish immune systems. When applied to rainbow trout diets, fungal-based feed is highly digestible, comparable to fishmeal-based feed, and positively impacts gut microbiomes. The increase of lactic acid bacteria (Lactococcus lactis) after consuming fungal-based feed suggests its potential as a fish feed prebiotic. 

While fungal biomass holds promise as a nutrient-rich fish feed source, its large-scale production on synthetic substrates poses economic challenges. To optimize production, organic-rich waste like Distiller's Dried Grains with Solubles (DDGS) and thin stillage from ethanol production are explored as substrates. Thin stillage, previously considered for fungal biomass production, faces difficulties due to its high solid content. Optimizing thin stillage's suspended solids for cultivating different filamentous fungi from Ascomycetes and Zygomycetes is necessary. Submerged cultivation of Aspergillus oryzae, Rhizopus delemar, and Neurospora intermedia was tested using various thin stillage dilutions. Cultivating these species in 75% diluted thin stillage yielded the highest biomass. The harvested fungal biomass contained around 50% protein and 45% essential amino acids, with ash content below 10%, enhancing fish digestibility. Notably, when 75% diluted thin stillage was used, the washing step could be skipped without compromising final biomass quality, streamlining production processes. Using fungal-based feed in fish nutrition presents a sustainable alternative to traditional fishmeal-based feed. It goes beyond protein and amino acids, providing other essential nutrients such as fatty acids, minerals, pigments etc. High digestibility and positive effects on fish health through gut microbiome modulation make it a valuable substitute for common protein sources. To enhance sustainability, scaling up fungal biomass production using diluted thin stillage as a substrate is a promising avenue. 

Place, publisher, year, edition, pages
Borås: Högskolan i Borås, 2024
Series
Skrifter från Högskolan i Borås, ISSN 0280-381X ; 148
Keywords
compound feed, edible filamentous fungi, essential amino acids, low-value substrates, polyunsaturated fatty acids, protein sources, submerged cultivation, thin stillage
National Category
Biochemistry Molecular Biology
Research subject
Resource Recovery
Identifiers
urn:nbn:se:hb:diva-31351 (URN)9789189833364 (ISBN)9789189833371 (ISBN)
Public defence
2024-02-23, C203, Allégatan 1, Borås, 10:00 (English)
Opponent
Available from: 2024-02-02 Created: 2024-01-19 Last updated: 2025-02-20Bibliographically approved

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Karimi, SajjadFerreira, JorgeTaherzadeh, Mohammad J

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